CDS

Accession Number TCMCG051C41943
gbkey CDS
Protein Id XP_006374541.1
Location join(10798516..10798539,10799288..10800339,10800464..10800587,10800708..10800959,10801058..10801207,10801314..10801871,10801994..10802092)
Gene LOC7457775
GeneID 7457775
Organism Populus trichocarpa

Protein

Length 752aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006374479.2
Definition protein NBR1 homolog isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category V
Description Ig-like domain from next to BRCA1 gene
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17987        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04137        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCTACTATGGTGATCAAGGTTAAATATAGTGATACACTTAGGCGTTTTAATGCTCACGTAAAGGAGAATGAGCAACTCGATCTTGACATGATTGCACTGAGGGAAAAGATCTTTGGTCTTTTTAATTTTCCTCCAGATGCTGATCTCACTCTGACCTATATTGATGAAGATGGGGATGTGGTTACTCTTGCTGATGATGATGATCTGCGTGATGTGATGAGGCAGAACCTGAAGTTTTTGAGGATTGATGTACAGCTTAATAATGATAAGTCTGGTAAATCTAATGCTAGATCTAGTGGTAGTTCTACCCCTATGAGGTCCCCCAGGGTCCAGAGTCCATTACCATGCCTCAACAATGGTGTTGCTGACGTTTTGAAATCTGTGCCAGAGCCCTTACGTGAAGTACTCTCAAAGATATCTCTCGACCTGACTTCAAAAGCTGTGGCTTCTAATACAGTGCTCACTGAGCTTGTTGACTGCTTTTCAAAAATGGGGCAATACCACCTGAATCCAACCTCCCAGTCTCATGATGGTATAGGCGCCCAAACTGGAGCTACAGCTCCTACAGTTCTAAATGCTTCCAAGGATGGTGGCTTGAAAGAAGACTTGCTGAATTTAAACTCACCTCTCAAAACTAGCCAGGAGGAGAGGTTTGAAAATGGTACTAAGACTGCGATGTCACCACACACAGCTGTCCCTTCTCCTGTTAATCTGAATCCTAACCCTCAAATTTCCAATTCGTTTGTGCATTATAAACCCCTTGCATCCTTCGTCCCTGCTTGTGATGATTGGAAGGAAGCCAAGAAACAGAATACTGGTCTTCCAACTGGGAAGCCTGGCTGGTTTGGTTTCCCCAACATTCCTGTGAATCATGGCTTTCCTTTATACACTGATTGTCCATTTAGTGGAATGTCAGTGGCAAATGACTCAGCTTCACGCACTCTCAAAAGTCATGTAATTAAGAGAAACAATTCTCTTAATAATCCCATGGTTGGCATGTTTCATAGGGGTGTTCAATGTGATGGTTGTGGTGTTCATCCAATTACCGGGCCTCGATACAAGTCCAAAGTTAAAGAGGATTATGACCTCTGCAGCATCTGCTTCGCTGAAATGGGTAATGAAGCTGATTACATCAAGATGGATAGGCCGATGCCTTATCGTAATCGGTGGTCTTTCAAGGGGTTTAATGATCCTACACAGAAATCTTGGGCCATTCCACAGCCTCTCTCTAAAGGTTCATATGGAGTAAAAGGAGCTCAACCTAAGCTAGACAGCCGTTTTGTTTTGGATGTCAATGTGTCAGATGGTACCATGATGCCTACATGTACTCCTTTTACCAAGATTTGGCGAATGCGCAACAATGGTAGTGTCGCATGGCCTCAGGGAGTGCGGCTTGTGTGGATTGGGGGAGACAGGTTCTTCAATACTGATTCTGTTGAGATAGAGATTCCAGTCAATGGTGTGCCTATTGATGGTGAACTTGATGTTGCAGCTGATTTTGTATCTCCTGCATTGCCTGGTAGATACATATCATACTGGAGGATGGCATACCCATCCGGTGGAAAATTCGGGCAGCGTGTTTGGGTTCTTATTGAGGTTGATGCTTCCCTGAAAGATCCATTCTTCAAATATCTGAACTTGAACGAGTCCCCCAATTACATTGGTTCTAAATTCCCTGGTGTTTTAGATATGAATGTCCAGCCTGCTGTGGATGGCTGTTTTCTGGAGCCTCAGAACAATACCTTGCTTTCAGAACCAGATGTCCCCATGGTTGACGAACAGCCTAAGAGCCAAGAACTAAAATTCCCTATAGATGATGCCTTACTGATTGGCCATGGTGTTTCAGCCTCTGCTCCTCCCCAGGCCATGCCTTCATCTGTTCCTGTTCTTTATCCAATGATAGACATTTCTGAAACAGTTCCTGCTAGTACCGAACTCCTTCCCGCTGCGGATGCTTCAACTTCCCCTGAAGAGGTCATTGTTGAAAATGCTGTTGAGAAGACCCTCCTAAAGGAACTCAAGGAAATGGGCTTCAAGCAGGTTGATTTGAATAAGGAGATCTTGAGGCGGAATGAGTATGATCTGGAGCAGTCAGTGGATGATCTTTGTGGTGTTTCTGACTGGGACCCCATTCTCGAGGAGTTGCAAGAGATGGGTTTCCGTGACAAGGAAATGAACAAGCTGCTGCTGAAGAAAAACAATGGGAGTATCAAGGGTGTGGTCATGGATATTCTCACCGGAAAGAAGGCATAG
Protein:  
MDSTMVIKVKYSDTLRRFNAHVKENEQLDLDMIALREKIFGLFNFPPDADLTLTYIDEDGDVVTLADDDDLRDVMRQNLKFLRIDVQLNNDKSGKSNARSSGSSTPMRSPRVQSPLPCLNNGVADVLKSVPEPLREVLSKISLDLTSKAVASNTVLTELVDCFSKMGQYHLNPTSQSHDGIGAQTGATAPTVLNASKDGGLKEDLLNLNSPLKTSQEERFENGTKTAMSPHTAVPSPVNLNPNPQISNSFVHYKPLASFVPACDDWKEAKKQNTGLPTGKPGWFGFPNIPVNHGFPLYTDCPFSGMSVANDSASRTLKSHVIKRNNSLNNPMVGMFHRGVQCDGCGVHPITGPRYKSKVKEDYDLCSICFAEMGNEADYIKMDRPMPYRNRWSFKGFNDPTQKSWAIPQPLSKGSYGVKGAQPKLDSRFVLDVNVSDGTMMPTCTPFTKIWRMRNNGSVAWPQGVRLVWIGGDRFFNTDSVEIEIPVNGVPIDGELDVAADFVSPALPGRYISYWRMAYPSGGKFGQRVWVLIEVDASLKDPFFKYLNLNESPNYIGSKFPGVLDMNVQPAVDGCFLEPQNNTLLSEPDVPMVDEQPKSQELKFPIDDALLIGHGVSASAPPQAMPSSVPVLYPMIDISETVPASTELLPAADASTSPEEVIVENAVEKTLLKELKEMGFKQVDLNKEILRRNEYDLEQSVDDLCGVSDWDPILEELQEMGFRDKEMNKLLLKKNNGSIKGVVMDILTGKKA